Detail view for rs6662295

Link to dbSNP entry

Link to Ensembl Variation entry

Sequence facts

chrpos (hg19)chrpos (hg38)ReferenceAlternate1000 Genomes Phase 1 FrequenciesSequence constraintdbSNP functional annotation
AFRAMRASNEURby GERPby SiPhy
chr111967905chr111907848GC0.60.480.60.54YesYesnone

Closest annotated gene
SourceDistanceDirectionID/LinkCommon nameDescription
GENCODE5'303ENSG00000199347.1RNU5E-1RNA, U5E small nuclear 1 [Source:HGNC Symbol;Acc:10215]
RefSeq3'11738NM_138346KIAA2013KIAA2013 [Source:HGNC Symbol;Acc:28513]

Regulatory chromatin states from DNAse and histone ChIP-Seq (Roadmap Epigenomics Consortium, 2015)

(Black = missing data)

Epigenome ID (EID)GroupMnemonicDescriptionChromatin states
(Core 15-state model)		Chromatin states
(25-state model
using 12 imputed marks)		H3K4me1H3K4me3H3K27acH3K9acDNase
E001ESCESC.I3ES-I3 Cells22_PromPH3K4me1_EnhH3K4me3_ProH3K9ac_Pro
E002ESCESC.WA7ES-WA7 Cells22_PromP
E003ESCESC.H1H1 Cells22_PromPH3K4me1_EnhH3K27ac_EnhH3K9ac_ProDNase
E004ES-derivESDR.H1.BMP4.MESOH1 BMP4 Derived Mesendoderm Cultured Cells22_PromPH3K27ac_EnhH3K9ac_ProDNase
E005ES-derivESDR.H1.BMP4.TROPH1 BMP4 Derived Trophoblast Cultured Cells22_PromPH3K27ac_EnhH3K9ac_ProDNase
E006ES-derivESDR.H1.MSCH1 Derived Mesenchymal Stem Cells22_PromPH3K9ac_ProDNase
E007ES-derivESDR.H1.NEUR.PROGH1 Derived Neuronal Progenitor Cultured Cells22_PromPH3K27ac_EnhDNase
E008ESCESC.H9H9 Cells18_EnhAcH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E009ES-derivESDR.H9.NEUR.PROGH9 Derived Neuronal Progenitor Cultured Cells7_Enh22_PromPH3K4me1_Enh
E010ES-derivESDR.H9.NEURH9 Derived Neuron Cultured Cells7_Enh22_PromPH3K4me1_EnhH3K4me3_Pro
E011ES-derivESDR.CD184.ENDOhESC Derived CD184+ Endoderm Cultured Cells14_EnhA2H3K27ac_EnhH3K9ac_Pro
E012ES-derivESDR.CD56.ECTOhESC Derived CD56+ Ectoderm Cultured Cells16_EnhW1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E013ES-derivESDR.CD56.MESOhESC Derived CD56+ Mesoderm Cultured Cells13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E014ESCESC.HUES48HUES48 Cells16_EnhW1H3K4me1_EnhH3K27ac_EnhH3K9ac_Pro
E015ESCESC.HUES6HUES6 Cells7_Enh22_PromPH3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E016ESCESC.HUES64HUES64 Cells14_EnhA2H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E017IMR90LNG.IMR90IMR90 fetal lung fibroblasts Cell Line22_PromPH3K27ac_EnhH3K9ac_ProDNase
E018iPSCIPSC.15biPS-15b Cells22_PromPH3K4me1_EnhH3K9ac_Pro
E019iPSCIPSC.18iPS-18 Cells22_PromPH3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E020iPSCIPSC.20BiPS-20b Cells13_EnhA1H3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E021iPSCIPSC.DF.6.9iPS DF 6.9 Cells22_PromPH3K27ac_EnhDNase
E022iPSCIPSC.DF.19.11iPS DF 19.11 Cells18_EnhAcH3K27ac_EnhDNase
E023MesenchFAT.MSC.DR.ADIPMesenchymal Stem Cell Derived Adipocyte Cultured Cells7_Enh22_PromPH3K4me1_EnhH3K9ac_Pro
E024ESCESC.4STARES-UCSF4 Cells22_PromP
E025MesenchFAT.ADIP.DR.MSCAdipose Derived Mesenchymal Stem Cell Cultured Cells22_PromPH3K9ac_Pro
E026MesenchSTRM.MRW.MSCBone Marrow Derived Cultured Mesenchymal Stem Cells13_EnhA1H3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E027EpithelialBRST.MYOBreast Myoepithelial Primary Cells22_PromPH3K4me1_EnhH3K4me3_ProH3K9ac_Pro
E028EpithelialBRST.HMEC.35Breast variant Human Mammary Epithelial Cells (vHMEC)22_PromPH3K4me1_EnhDNase
E029HSC & B-cellBLD.CD14.PCPrimary monocytes from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K27ac_EnhDNase
E030HSC & B-cellBLD.CD15.PCPrimary neutrophils from peripheral blood1_TssA22_PromPH3K4me1_EnhH3K4me3_Pro
E031HSC & B-cellBLD.CD19.CPCPrimary B cells from cord blood2_TssAFlnk13_EnhA1H3K4me1_EnhH3K4me3_Pro
E032HSC & B-cellBLD.CD19.PPCPrimary B cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E033Blood & T-cellBLD.CD3.CPCPrimary T cells from cord blood7_Enh13_EnhA1H3K4me3_ProDNase
E034Blood & T-cellBLD.CD3.PPCPrimary T cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K27ac_EnhDNase
E035HSC & B-cellBLD.CD34.PCPrimary hematopoietic stem cells13_EnhA1H3K4me1_Enh
E036HSC & B-cellBLD.CD34.CCPrimary hematopoietic stem cells short term culture16_EnhW1H3K4me1_Enh
E037Blood & T-cellBLD.CD4.MPCPrimary T helper memory cells from peripheral blood 27_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E038Blood & T-cellBLD.CD4.NPCPrimary T helper naive cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E039Blood & T-cellBLD.CD4.CD25M.CD45RA.NPCPrimary T helper naive cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E040Blood & T-cellBLD.CD4.CD25M.CD45RO.MPCPrimary T helper memory cells from peripheral blood 17_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E041Blood & T-cellBLD.CD4.CD25M.IL17M.PL.TPCPrimary T helper cells PMA-I stimulated7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E042Blood & T-cellBLD.CD4.CD25M.IL17P.PL.TPCPrimary T helper 17 cells PMA-I stimulated13_EnhA1H3K4me1_EnhH3K27ac_Enh
E043Blood & T-cellBLD.CD4.CD25M.TPCPrimary T helper cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E044Blood & T-cellBLD.CD4.CD25.CD127M.TREGPCPrimary T regulatory cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E045Blood & T-cellBLD.CD4.CD25I.CD127.TMEMPCPrimary T cells effector/memory enriched from peripheral blood13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E046HSC & B-cellBLD.CD56.PCPrimary Natural Killer cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E047Blood & T-cellBLD.CD8.NPCPrimary T CD8+ naive cells from peripheral blood7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E048Blood & T-cellBLD.CD8.MPCPrimary T CD8+ memory cells from peripheral blood13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E049MesenchSTRM.CHON.MRW.DR.MSCMesenchymal Stem Cell Derived Chondrocyte Cultured Cells13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E050HSC & B-cellBLD.MOB.CD34.PC.FPrimary hematopoietic stem cells G-CSF-mobilized Female7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E051HSC & B-cellBLD.MOB.CD34.PC.MPrimary hematopoietic stem cells G-CSF-mobilized Male7_Enh16_EnhW1H3K4me1_EnhDNase
E052MyosatMUS.SATMuscle Satellite Cultured Cells22_PromPH3K4me1_EnhH3K4me3_ProH3K9ac_Pro
E053NeurosphBRN.CRTX.DR.NRSPHRCortex derived primary cultured neurospheres1_TssA22_PromPH3K4me3_Pro
E054NeurosphBRN.GANGEM.DR.NRSPHRGanglion Eminence derived primary cultured neurospheres22_PromPH3K4me3_Pro
E055EpithelialSKIN.PEN.FRSK.FIB.01Foreskin Fibroblast Primary Cells skin0115_EnhAFH3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E056EpithelialSKIN.PEN.FRSK.FIB.02Foreskin Fibroblast Primary Cells skin021_TssA13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E057EpithelialSKIN.PEN.FRSK.KER.02Foreskin Keratinocyte Primary Cells skin0222_PromPDNase
E058EpithelialSKIN.PEN.FRSK.KER.03Foreskin Keratinocyte Primary Cells skin0313_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E059EpithelialSKIN.PEN.FRSK.MEL.01Foreskin Melanocyte Primary Cells skin0113_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E061EpithelialSKIN.PEN.FRSK.MEL.03Foreskin Melanocyte Primary Cells skin037_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E062Blood & T-cellBLD.PER.MONUC.PCPrimary mononuclear cells from peripheral blood16_EnhW1H3K4me1_EnhH3K9ac_Pro
E063AdiposeFAT.ADIP.NUCAdipose Nuclei13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E065HeartVAS.AORAorta22_PromP
E066OtherLIV.ADLTLiver7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E067BrainBRN.ANG.GYRBrain Angular Gyrus14_EnhA2H3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E068BrainBRN.ANT.CAUDBrain Anterior Caudate22_PromPH3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E069BrainBRN.CING.GYRBrain Cingulate Gyrus14_EnhA2H3K27ac_EnhH3K9ac_Pro
E070BrainBRN.GRM.MTRXBrain Germinal Matrix22_PromPH3K4me3_Pro
E071BrainBRN.HIPP.MIDBrain Hippocampus Middle22_PromPH3K27ac_Enh
E072BrainBRN.INF.TMPBrain Inferior Temporal Lobe14_EnhA2H3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E073BrainBRN.DL.PRFRNTL.CRTXBrain_Dorsolateral_Prefrontal_Cortex22_PromPH3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E074BrainBRN.SUB.NIGBrain Substantia Nigra22_PromPH3K27ac_EnhH3K9ac_Pro
E075DigestiveGI.CLN.MUCColonic Mucosa16_EnhW1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E076Sm. MuscleGI.CLN.SM.MUSColon Smooth Muscle7_Enh16_EnhW1H3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E077DigestiveGI.DUO.MUCDuodenum Mucosa16_EnhW1H3K4me1_EnhH3K9ac_Pro
E078Sm. MuscleGI.DUO.SM.MUSDuodenum Smooth Muscle13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E079DigestiveGI.ESOEsophagus15_EnhAFH3K4me3_ProH3K27ac_Enh
E080OtherADRL.GLND.FETFetal Adrenal Gland16_EnhW1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E081BrainBRN.FET.MFetal Brain Male7_Enh22_PromPH3K4me1_EnhDNase
E082BrainBRN.FET.FFetal Brain Female22_PromPH3K4me3_ProDNase
E083HeartHRT.FETFetal Heart22_PromPH3K9ac_ProDNase
E084DigestiveGI.L.INT.FETFetal Intestine Large14_EnhA2H3K27ac_EnhDNase
E085DigestiveGI.S.INT.FETFetal Intestine Small16_EnhW1H3K4me1_EnhH3K27ac_EnhDNase
E086OtherKID.FETFetal Kidney1_TssA14_EnhA2H3K4me3_ProH3K9ac_ProDNase
E087OtherPANC.ISLTPancreatic Islets22_PromPH3K9ac_Pro
E088OtherLNG.FETFetal Lung14_EnhA2H3K4me3_ProH3K9ac_ProDNase
E089MuscleMUS.TRNK.FETFetal Muscle Trunk7_Enh14_EnhA2H3K4me1_EnhH3K27ac_EnhDNase
E090MuscleMUS.LEG.FETFetal Muscle Leg7_Enh16_EnhW1H3K4me3_ProH3K27ac_EnhDNase
E091OtherPLCNT.FETPlacenta7_Enh16_EnhW1H3K4me3_ProH3K27ac_EnhDNase
E092DigestiveGI.STMC.FETFetal Stomach7_Enh13_EnhA1H3K4me1_EnhH3K27ac_EnhDNase
E093ThymusTHYM.FETFetal Thymus7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhDNase
E094DigestiveGI.STMC.GASTGastric22_PromPH3K27ac_EnhDNase
E095HeartHRT.VENT.LLeft Ventricle22_PromPH3K27ac_Enh
E096OtherLNGLung16_EnhW1H3K4me3_ProH3K27ac_Enh
E097OtherOVRYOvary22_PromPDNase
E098OtherPANCPancreas22_PromPH3K4me3_ProH3K27ac_EnhDNase
E099OtherPLCNT.AMNPlacenta Amnion15_EnhAFH3K4me1_EnhH3K4me3_ProH3K27ac_Enh
E100MuscleMUS.PSOASPsoas Muscle22_PromPH3K27ac_EnhDNase
E101DigestiveGI.RECT.MUC.29Rectal Mucosa Donor 2914_EnhA2H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E102DigestiveGI.RECT.MUC.31Rectal Mucosa Donor 3122_PromPH3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E103Sm. MuscleGI.RECT.SM.MUSRectal Smooth Muscle16_EnhW1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E104HeartHRT.ATR.RRight Atrium22_PromPH3K27ac_Enh
E105HeartHRT.VNT.RRight Ventricle22_PromPH3K27ac_Enh
E106DigestiveGI.CLN.SIGSigmoid Colon22_PromPH3K27ac_Enh
E107MuscleMUS.SKLT.MSkeletal Muscle Male22_PromPH3K4me1_EnhH3K9ac_Pro
E108MuscleMUS.SKLT.FSkeletal Muscle Female13_EnhA1H3K4me1_EnhH3K27ac_EnhH3K9ac_Pro
E109DigestiveGI.S.INTSmall Intestine16_EnhW1H3K4me3_ProH3K27ac_EnhDNase
E110DigestiveGI.STMC.MUCStomach Mucosa16_EnhW1H3K4me1_EnhH3K4me3_ProH3K9ac_Pro
E111Sm. MuscleGI.STMC.MUSStomach Smooth Muscle7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E112ThymusTHYMThymus14_EnhA2H3K4me3_ProH3K27ac_Enh
E113OtherSPLNSpleen15_EnhAFH3K4me3_ProH3K27ac_Enh
E114ENCODE2012LNG.A549.ETOH002.CNCRA549 EtOH 0.02pct Lung Carcinoma Cell Line1_TssA13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E115ENCODE2012BLD.DND41.CNCRDnd41 TCell Leukemia Cell Line7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_Pro
E116ENCODE2012BLD.GM12878GM12878 Lymphoblastoid Cells7_Enh13_EnhA1H3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E117ENCODE2012CRVX.HELAS3.CNCRHeLa-S3 Cervical Carcinoma Cell Line2_TssAFlnk13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E118ENCODE2012LIV.HEPG2.CNCRHepG2 Hepatocellular Carcinoma Cell Line1_TssA13_EnhA1H3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E119ENCODE2012BRST.HMECHMEC Mammary Epithelial Primary Cells7_Enh13_EnhA1H3K27ac_EnhH3K9ac_ProDNase
E120ENCODE2012MUS.HSMMHSMM Skeletal Muscle Myoblasts Cells22_PromPH3K27ac_EnhH3K9ac_ProDNase
E121ENCODE2012MUS.HSMMTHSMM cell derived Skeletal Muscle Myotubes Cells13_EnhA1H3K27ac_EnhH3K9ac_ProDNase
E122ENCODE2012VAS.HUVECHUVEC Umbilical Vein Endothelial Primary Cells7_Enh13_EnhA1H3K4me1_EnhH3K27ac_EnhH3K9ac_ProDNase
E123ENCODE2012BLD.K562.CNCRK562 Leukemia Cells7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E124ENCODE2012BLD.CD14.MONOMonocytes-CD14+ RO01746 Primary Cells2_PromUH3K4me1_EnhH3K27ac_EnhH3K9ac_ProDNase
E125ENCODE2012BRN.NHANH-A Astrocytes Primary Cells7_Enh13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E126ENCODE2012SKIN.NHDFADNHDF-Ad Adult Dermal Fibroblast Primary Cells7_Enh13_EnhA1H3K27ac_EnhH3K9ac_ProDNase
E127ENCODE2012SKIN.NHEKNHEK-Epidermal Keratinocyte Primary Cells13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_EnhH3K9ac_ProDNase
E128ENCODE2012LNG.NHLFNHLF Lung Fibroblast Primary Cells15_EnhAFH3K27ac_EnhH3K9ac_ProDNase
E129ENCODE2012BONE.OSTEOOsteoblast Primary Cells13_EnhA1H3K4me1_EnhH3K4me3_ProH3K27ac_Enh

Proteins bound in ChIP-Seq experiments (ENCODE Project Consortium, 2011)

Cell IDProtein
A549CTCF
A549CTCF
AG04449CTCF
AG04450CTCF
AG09309CTCF
AG09319CTCF
AG10803CTCF
AoAFCTCF
BJCTCF
Caco-2CTCF
FibroblCTCF
GM06990CTCF
GM12864CTCF
GM12865CTCF
GM12872CTCF
GM12873CTCF
GM12874CTCF
GM12875CTCF
GM12878CTCF
GM12878CTCF
GM12878CTCF
GM12878CTCF
GM12878NRF1
GM12878RAD21
GM12878RAD21
GM12878RXRA
GM12878SMC3
GM12878SRF
GM12878ZNF143
GlioblaCTCF
H1-hESCCTCF
H1-hESCCTCF
H1-hESCJUND
H1-hESCRAD21
H1-hESCRAD21
H1-hESCSRF
HA-spCTCF
HBMECCTCF
HCFaaCTCF
HCPEpiCCTCF
HEEpiCCTCF
HEK293(b)ELK4
HEK293CTCF
HL-60CTCF
HMECCTCF
HMECCTCF
HMFCTCF
HPAFCTCF
HPFCTCF
HRECTCF
HRPEpiCCTCF
HSMMCTCF
HSMMtubeCTCF
HUVECCTCF
HUVECCTCF
HUVECCTCF
HeLa-S3AP2ALPHA
HeLa-S3AP2GAMMA
HeLa-S3CJUN
HeLa-S3CTCF
HeLa-S3CTCF
HeLa-S3CTCF
HeLa-S3RAD21
HeLa-S3SMC3
HepG2CTCF
HepG2CTCF
HepG2CTCF
HepG2CTCF
HepG2RAD21
HepG2RAD21
HepG2SRF
K562CCNT2
K562CMYC
K562CMYC
K562CTCF
K562CTCF
K562CTCF
K562CTCFL
K562ELF1
K562MAX
K562NFYA
K562NRF1
K562RAD21
K562RAD21
K562SMC3
K562SRF
MCF-7CTCF
MCF-7CTCF
MCF-7CTCF
NH-ACTCF
NHDF-AdCTCF
NHEKCTCF
NHEKCTCF
NHLFCTCF
OsteoblCTCF
PBDEPOL2
ProgFibCTCF
SAECCTCF
SK-N-SH_RACTCF
SK-N-SH_RACTCF
SK-N-SH_RARAD21
WERI-Rb-1CTCF

Hits from selected eQTL studies

Study IDPaper TitlePMIDTissueCorrelated genep-value
GTEx2015_v6The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans25954001Esophagus_MucosaMFN24.0270227185345e-06
GTEx2015_v6The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans25954001TestisMFN21.12273387041516e-06
GTEx2015_v6The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans25954001Whole_BloodKIAA20139.47440791454587e-07
Westra2013Systematic identification of trans eQTLs as putative drivers of known disease associations24013639Whole_BloodKIAA2013|NPPA2.6809141772571974E-7
Westra2013Systematic identification of trans eQTLs as putative drivers of known disease associations24013639Whole_BloodMFN22.221147398994037E-37
Westra2013Systematic identification of trans eQTLs as putative drivers of known disease associations24013639Whole_BloodPLOD11.0156510540529986E-60

Regulatory motifs altered

Position Weight Matrix ID
(Library from Kheradpour and Kellis, 2013)		StrandRefAltMatch on:
Ref: TCTTCTGGGACCAGACTCTGCTCTGCCCCGCGGTGGTGGCCTCAGGCGCAGCGCTAAAA
Alt: TCTTCTGGGACCAGACTCTGCTCTGCCCCCCGGTGGTGGCCTCAGGCGCAGCGCTAAAA
CTCF_disc1+-0.511.2
                    DNHWMBRSYRCCMYCTASTGGH
CTCF_disc2--4.67.3
                            YGCCMCCTGGT
CTCF_disc5-7.514.3
                           SHGSSHBCHSSHSS
CTCF_disc7-8.312.2
                               CCCCWGSYGG
CTCF_disc9-12.212.8
                           SHKSSCHSYDSDSNNS
CTCF_known1-3.115.1
                         BRSYGCCMYCTRSTGGYHR
ERalpha-a_disc4-10.49.9
                      SHBSNSNSNSCHNS
Ets_disc9-9.611.3
                         SNCBBSSBSSNS
Rad21_disc1-613.9
                       WMBRSYGCCMYCTRSTGGYH
Rad21_disc5-10.711.4
                         BNSHSCCMNSYNS
Rad21_disc6-10.112.2
                             VSYDSSMNSNNSNDSNS
Rad21_disc7+10.712
                              SBNSSHBSNNSWGSS
Rad21_disc8+10.811.7
                          SSHGSSMNSNSSNS
SMC3_disc1-10.317.1
                           SYGCCMYCTGSTGGY
SP1_disc3-5.310.9
                        SYCCYKCCYYCHNVS
Zic_4+11.514.9
                             BMCCCCCKGGGGKSB
p300_disc9-1111.6
                           SNSSNSNSNSNNSSNSS